NEWS
rasterdiv 0.3.6 (2024-11-06)
Minor changes
- Refixes \alias to
load_copNDVI() (see warining raised by Brian Ripley)
- Sets Classical Rao's = 0 for window with only 1 non-NA value (see bug raised by Jakub Nowosad)
rasterdiv 0.3.5 (2024-10-14)
Minor changes
- Adds \alias to load_copNDVI()
- Removes TODO document
Major changes
- Adds
twdtw as a distance methods for paRao()
- Adds back
Rao() as an alias for paRao(alpha=2)
Minor changes
- Changes how
N is intended in mpaRaoAreaS
- Other improvements in
paRaoS and paRaoP
- Fixes bug in progBar for
paRao()
rasterdiv 0.3.4 (2024-03-04)
Major changes
- Adds back CRE function (leaving old function syntax)
Minor changes
- Organises "accessory functions" in a separate file
- Documents almost all "accessory functions"
- Tries to improve progress bar
- Simplify heliPrep()
- Matches package with book chapter
rasterdiv 0.3.3
Major changes
- Adds heliPrep and heliPlot for helical graphs
- Temporarily removes CRE function
- Adds a vignettes for accRao (4)
- Adds a vignettes for helical plots (5)
Minor changes
- Small changes in all vignettes
- Updated documentation to Roxygen style
- Uses terra in the place of raster
- Changes data type of copNDVI (SpatRaster now)
- Changes data type of world (SpatVector now)
- Improves documentation
rasterdiv 0.3.2
Minor changes
- Fixes minor "bug" for area based Rao that did not allow for polygons containing raster matrices with just one value.
- Adds an additional examples for Area based Rao.
rasterdiv 0.3.1 (2022-11-24)
Minor changes
- Fixes repetition in paRao() manual
rasterdiv 0.3.0
Major changes
- Adds multidimension area-based Rao's index in paRao().
Minor changes
- Reorganises vignettes.
- Adds new GitHub site with pkgdown().
rasterdiv 0.2.5.2
Minor changes
- Adds testthat tests for area-based Rao.
rasterdiv 0.2.5.1
Minor changes
- Made area-based paRao more efficient.
- Adapted vignettes to what changed.
rasterdiv 0.2.5
Major changes
- Starting to implement area-based paRao.
Minor changes
- Vignettes reduced
- Added world vector dataset
rasterdiv 0.2.4
Major changes
- accRao now RaoAUC
- RaoAUC working with paRao in multidimensional mode.
Minor changes
- Fixed some inconsistencies in the manual.
rasterdiv 0.2.2
Major changes
- Fixed issue due to high alphas which caused parametric Rao's to go to infinite (just added a warning for the multidimensional version).
- Rao still deprecated but connected in the background with paRao(..., alpha=1) for continuity with older versions.
Major changes
- Rao() is now deprecated, replaced by paRao(..., alpha=1).
- Multiple window sizes can now be indicated in paRao(..., window=c(3,5)).
- Multidimension paRao now working for np>1.
Minor changes
- Vignette for multidimension Rao (rasterdiv_advanced_multimensionRao).
- Added tests folder for testthat.
rasterdiv 0.2.1
Major changes
- A new function accRao to derive the accumulation function of parametric Rao's index over a range of alphas. A vignette (rasterdiv_advanced_accRao) to show how to apply this function was added to the package.
rasterdiv 0.2.0
Major changes
- New parametrization of Rao's quadratic entropy. This parametrisation reconciles abundance-based indexes with distance-based indexes (Rao). The new function is called paRao, which stands for parametric Rao's entropy.
Minor changes
- Minor improvements in the structure of all main functions.
- Option to save the output as a rasterstack for all main functions.
- pbapply and pbmcapply for progress bars.
- Main vignette (rasterdiv_basics) simplified.
rasterdiv 0.1.0
First release which includes functions to compute on numerical matrices the following indexes:
- Shannon–Wiener index of diversity
- Rényi entropy
- Simpson index
- Berger-Parker index
- Hill numbers of order q or effective number of species
- Pielou evenness
- Rao's quadratic entropy
- Cumulative Residual entropy